3. Oncotrack - observational clinical cohort datasets

3. Oncotrack - observational clinical cohort datasets

faircookbook.elixir-europe.org

An online, open and live resource for the Life Sciences with recipes that help you to make and keep data Findable, Accessible, Interoperable and Reusable; in on

View Original

Share this recipe:

Ingredients

  • Data Standards
  • Metadata model: Oncotrack cohort metadata
  • Oncotrack drug sensitivity data
  • Oncotrack metadata template
  • Vocabularies and terminologies: Pharmaceutical drug names follow the nomenclature of ChEBI and ChEMBL database. All drug ontologies are listed here.
  • All abbreviations and acronyms used in OncoTrack cohort metadata are listed in the OncoTrack public metadata acronym table.
  • Data format: Input data: Excel Output data: tab-delimited text file JSON file (JSON schema: BioSamples databases JSON schema)

More Like This